Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12735
Experiment: 36hr PHYTO3 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO3 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,903,852 | + | BPHYT_RS12730 | 0.83 | +2.2 | |
2,903,852 | + | BPHYT_RS12730 | 0.83 | -0.2 | |
2,903,852 | + | BPHYT_RS12730 | 0.83 | -0.7 | |
2,903,853 | - | BPHYT_RS12730 | 0.84 | +0.2 | |
2,903,853 | - | BPHYT_RS12730 | 0.84 | +1.0 | |
2,904,079 | + | -0.7 | |||
2,904,132 | - | -0.3 | |||
2,904,372 | + | -0.5 | |||
2,904,382 | + | -0.8 | |||
2,904,382 | + | -1.7 |
Or see this region's nucleotide sequence