Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11995

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,728,601	+				+0.9
2,728,602	-				+0.2
2,728,609	+				-1.4
2,728,782	+				-2.0
2,728,790	+				+0.3
2,728,790	+				-0.4
2,728,791	-				-1.5
2,728,791	-				-1.1
2,728,928	-		BPHYT_RS11990	0.13	+0.1
2,729,245	+		BPHYT_RS11990	0.56	+0.6
2,729,500	-		BPHYT_RS11990	0.90	-0.5
2,729,811	-		BPHYT_RS11995	0.19	-1.3
2,730,506	-		BPHYT_RS11995	0.76	-0.4
2,730,525	-		BPHYT_RS11995	0.77	-0.6
2,730,595	+		BPHYT_RS11995	0.83	-1.4
2,730,800	+				-0.6
2,730,803	-				-1.1