Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11175

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,536,511	+		BPHYT_RS11165	0.59	+0.4
2,536,512	-		BPHYT_RS11165	0.59	-0.3
2,536,564	+		BPHYT_RS11165	0.64	-1.9
2,536,565	-		BPHYT_RS11165	0.64	+0.1
2,536,605	-		BPHYT_RS11165	0.68	-0.2
2,536,764	-		BPHYT_RS11165	0.82	+0.5
2,537,023	+				+1.4
2,537,263	-		BPHYT_RS11170	0.63	+0.5
2,537,331	+				+0.8
2,537,585	+				-1.7
2,537,637	-		BPHYT_RS11175	0.11	-1.4
2,537,637	-		BPHYT_RS11175	0.11	+0.1
2,537,934	-		BPHYT_RS11175	0.33	-0.6
2,537,934	-		BPHYT_RS11175	0.33	-1.3
2,538,015	-		BPHYT_RS11175	0.40	-1.0
2,538,015	-		BPHYT_RS11175	0.40	-1.2
2,538,015	-		BPHYT_RS11175	0.40	-1.6
2,538,170	+		BPHYT_RS11175	0.52	-1.2
2,538,365	+		BPHYT_RS11175	0.67	+0.6
2,538,365	+		BPHYT_RS11175	0.67	+1.0
2,538,462	-		BPHYT_RS11175	0.74	-0.4
2,538,687	-				-2.2
2,538,790	+				-1.0
2,538,819	+				-1.0
2,538,939	-				-0.8
2,538,939	-				+0.4
2,538,947	-				-0.4
2,538,994	+				-0.6
2,538,994	+				-2.4
2,538,995	-				-3.0
2,539,043	+				+1.6
2,539,043	+				-0.5
2,539,055	+				-1.8
2,539,058	-				-0.1
2,539,059	+				+2.8
2,539,110	+				-0.8
2,539,111	-				+2.1
2,539,280	-		BPHYT_RS11180	0.11	-0.2
2,539,731	+		BPHYT_RS11180	0.37	+0.1
2,539,732	-		BPHYT_RS11180	0.37	-0.2