Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10900

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,479,645	-				-0.1
2,479,709	-				+1.8
2,479,757	+				+0.1
2,479,758	-				-0.7
2,479,758	-				+2.2
2,479,765	+				-0.8
2,479,765	+				+0.6
2,480,050	-		BPHYT_RS10895	0.44	-0.8
2,480,292	+		BPHYT_RS10895	0.81	-0.8
2,480,697	+		BPHYT_RS10900	0.20	-0.1
2,480,825	+		BPHYT_RS10900	0.29	-1.5
2,480,825	+		BPHYT_RS10900	0.29	-0.9
2,480,825	+		BPHYT_RS10900	0.29	+0.1
2,480,826	-		BPHYT_RS10900	0.29	-2.0
2,481,530	+		BPHYT_RS10900	0.79	-0.8
2,481,878	-				-0.0
2,482,694	-		BPHYT_RS10905	0.75	+1.1