Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05390

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,238,818	-		BPHYT_RS05385	0.85	-0.1
1,238,818	-		BPHYT_RS05385	0.85	-0.3
1,238,902	-				-0.9
1,239,100	+				-0.3
1,239,101	-				-0.8
1,239,160	+				-1.4
1,239,213	-				-0.1
1,239,771	-				-0.5
1,240,065	+		BPHYT_RS05390	0.48	+1.8
1,240,249	+		BPHYT_RS05390	0.77	+0.5
1,240,250	-		BPHYT_RS05390	0.77	-0.4
1,240,367	-				+0.7
1,240,441	-				+0.2
1,240,517	-		BPHYT_RS05395	0.41	+0.7