Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35580

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,576,075	-		BPHYT_RS35570	0.74	+0.7
3,576,081	+		BPHYT_RS35570	0.77	-0.8
3,576,231	+				+2.0
3,576,571	-		BPHYT_RS35575	0.55	+0.6
3,576,654	+		BPHYT_RS35575	0.73	-0.7
3,576,655	-		BPHYT_RS35575	0.74	+1.6
3,576,655	-		BPHYT_RS35575	0.74	-0.8
3,576,764	+				-0.7
3,576,797	+				-1.0
3,576,819	+				+0.2
3,576,819	+				-0.2
3,576,822	-				+0.1
3,576,822	-				-1.5
3,576,882	+				-0.3
3,576,883	-				-0.4
3,576,883	-				-0.6
3,576,921	+				-1.2
3,577,078	+		BPHYT_RS35580	0.47	-0.9
3,577,078	+		BPHYT_RS35580	0.47	-0.1
3,577,119	+		BPHYT_RS35580	0.56	-1.5
3,577,321	-				-0.9
3,577,439	+				-0.3
3,577,570	+				+0.2
3,577,570	+				-0.6
3,577,570	+				-1.8
3,577,571	-				-1.1
3,577,744	+		BPHYT_RS35585	0.58	-0.7
3,577,744	+		BPHYT_RS35585	0.58	-1.2
3,577,747	-		BPHYT_RS35585	0.59	-0.4
3,577,872	+				+0.5
3,577,873	-				+0.1
3,578,265	-		BPHYT_RS35590	0.33	-0.5
3,578,265	-		BPHYT_RS35590	0.33	-1.6
3,578,265	-		BPHYT_RS35590	0.33	+0.2