Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35440

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,551,489	-				+0.4
3,551,525	+				-1.3
3,551,525	+				-0.1
3,551,552	+				-0.2
3,551,630	-				+0.2
3,551,797	+		BPHYT_RS35435	0.32	-1.2
3,551,956	+		BPHYT_RS35435	0.56	-0.7
3,551,968	+		BPHYT_RS35435	0.58	-0.2
3,551,969	-		BPHYT_RS35435	0.58	-0.8
3,552,211	-				+1.1
3,552,211	-				+1.3
3,552,353	-				-0.1
3,552,451	+		BPHYT_RS35440	0.10	+0.3
3,552,471	-		BPHYT_RS35440	0.12	+0.7
3,552,471	-		BPHYT_RS35440	0.12	+0.2
3,552,474	+		BPHYT_RS35440	0.12	+0.4
3,552,474	+		BPHYT_RS35440	0.12	-0.7
3,552,474	+				+2.6
3,552,475	-		BPHYT_RS35440	0.12	-0.5
3,552,475	-		BPHYT_RS35440	0.12	+0.4
3,552,475	-		BPHYT_RS35440	0.12	-0.5
3,552,486	-		BPHYT_RS35440	0.13	-1.3
3,552,536	+		BPHYT_RS35440	0.17	-1.0
3,552,585	+		BPHYT_RS35440	0.21	+0.1
3,552,586	-		BPHYT_RS35440	0.21	-0.5
3,552,592	-		BPHYT_RS35440	0.22	+2.6
3,552,661	-		BPHYT_RS35440	0.27	-0.0
3,552,755	+		BPHYT_RS35440	0.35	+0.4
3,552,756	-		BPHYT_RS35440	0.35	-1.0
3,552,848	+		BPHYT_RS35440	0.42	+0.1
3,552,848	+		BPHYT_RS35440	0.42	-0.8
3,552,894	-		BPHYT_RS35440	0.46	-0.4
3,552,921	-		BPHYT_RS35440	0.48	+1.7
3,553,385	+		BPHYT_RS35440	0.86	+0.7
3,553,582	+				+0.3
3,553,671	-				+0.7
3,554,472	-		BPHYT_RS35445	0.54	+0.0
3,554,505	+		BPHYT_RS35445	0.56	-0.4
3,554,505	+		BPHYT_RS35445	0.56	+0.0
3,554,506	-		BPHYT_RS35445	0.56	-0.1
3,554,506	-		BPHYT_RS35445	0.56	+0.2
3,554,506	-		BPHYT_RS35445	0.56	-1.1