Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34385

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,321,429	-		BPHYT_RS34380	0.52	-0.6
3,321,586	+		BPHYT_RS34380	0.61	+0.5
3,321,677	+		BPHYT_RS34380	0.66	+0.5
3,321,678	-		BPHYT_RS34380	0.66	-0.2
3,321,770	+		BPHYT_RS34380	0.71	+0.5
3,321,842	+		BPHYT_RS34380	0.75	-1.2
3,322,330	-				+0.0
3,322,330	-				+0.5
3,322,374	+				+0.9
3,322,374	+				-0.1
3,322,374	+				+0.2
3,322,375	-				-1.5
3,322,377	+				-0.7
3,322,541	+		BPHYT_RS34385	0.48	+0.1
3,322,542	-		BPHYT_RS34385	0.48	-2.5
3,322,542	-		BPHYT_RS34385	0.48	+0.6
3,322,542	-		BPHYT_RS34385	0.48	-1.6
3,322,542	-		BPHYT_RS34385	0.48	+0.9
3,322,562	+		BPHYT_RS34385	0.55	-1.4
3,322,563	-		BPHYT_RS34385	0.56	+0.3
3,322,587	-		BPHYT_RS34385	0.64	+0.3
3,322,604	+		BPHYT_RS34385	0.71	-0.9
3,322,604	+		BPHYT_RS34385	0.71	+0.0
3,322,604	+		BPHYT_RS34385	0.71	+0.4
3,322,604	+		BPHYT_RS34385	0.71	-1.2
3,322,709	-				+0.2
3,322,944	+				-0.7
3,322,945	-				+2.1
3,323,329	+				+0.5
3,323,411	+				-1.9
3,323,412	-				+0.1
3,323,467	+				+0.1
3,323,566	+				+0.4
3,323,566	+				-0.6
3,323,566	+				-1.6
3,323,566	+				+1.7
3,323,567	-				-0.2
3,323,567	-				-1.3