Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34090

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,244,852	+				+3.5
3,244,902	+				+0.2
3,244,962	+				-0.5
3,244,963	-				+0.0
3,244,974	-				-1.7
3,245,019	+				-1.2
3,245,019	+				-0.5
3,245,079	-		BPHYT_RS34085	0.14	+1.6
3,245,117	+		BPHYT_RS34085	0.18	+0.8
3,245,375	+		BPHYT_RS34085	0.49	-1.5
3,245,771	+				-1.5
3,245,772	-				-0.8
3,245,866	+				-0.2
3,245,867	-				-0.9
3,245,956	+		BPHYT_RS34090	0.11	+0.5
3,246,005	-		BPHYT_RS34090	0.14	-1.4
3,246,005	-		BPHYT_RS34090	0.14	+1.0
3,246,073	+		BPHYT_RS34090	0.20	+1.1
3,246,074	-		BPHYT_RS34090	0.20	-0.7
3,246,074	-		BPHYT_RS34090	0.20	-0.2
3,246,158	+		BPHYT_RS34090	0.26	+0.6
3,246,159	-		BPHYT_RS34090	0.27	-0.1
3,246,160	+		BPHYT_RS34090	0.27	-0.6
3,246,160	+		BPHYT_RS34090	0.27	-1.0
3,246,161	-		BPHYT_RS34090	0.27	-1.7
3,246,161	-		BPHYT_RS34090	0.27	-1.2
3,246,487	+		BPHYT_RS34090	0.52	-0.4
3,246,488	-		BPHYT_RS34090	0.52	+0.8
3,246,885	-		BPHYT_RS34090	0.83	-0.1
3,247,168	-				-0.1
3,247,401	+		BPHYT_RS34095	0.18	-0.5
3,247,440	+		BPHYT_RS34095	0.21	-0.3
3,247,501	-		BPHYT_RS34095	0.27	-0.9
3,247,570	-		BPHYT_RS34095	0.34	+0.3
3,247,762	-		BPHYT_RS34095	0.52	-0.3
3,247,762	-		BPHYT_RS34095	0.52	-0.2