Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33240

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,038,759	+		BPHYT_RS33235	0.79	-0.3
3,038,760	-		BPHYT_RS33235	0.79	-1.7
3,038,916	+		BPHYT_RS33235	0.87	-0.1
3,038,916	+		BPHYT_RS33235	0.87	+1.5
3,038,917	-		BPHYT_RS33235	0.87	-1.0
3,039,031	-				+0.1
3,039,068	+				+1.5
3,039,069	-				-0.1
3,039,353	-				-1.3
3,039,353	-				-1.2
3,039,437	-				-0.4
3,039,438	+				+0.2
3,039,523	+				+0.0
3,039,527	+				+0.4
3,039,916	+		BPHYT_RS33240	0.33	-1.7
3,039,917	-		BPHYT_RS33240	0.33	-0.0
3,040,124	-		BPHYT_RS33240	0.70	+1.9
3,040,370	+				-0.2
3,040,371	-				-2.6
3,040,686	+		BPHYT_RS33245	0.71	+0.2
3,040,686	+		BPHYT_RS33245	0.71	+0.8
3,040,687	-		BPHYT_RS33245	0.71	-0.0
3,040,758	+				+1.5
3,040,771	-				-0.9
3,040,829	+				-0.4
3,040,989	-				+0.6
3,041,000	+				+1.2
3,041,006	+				-2.0
3,041,006	+				-1.9