Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32055
Experiment: 36hr PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO2 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 2,765,274 | + | BPHYT_RS32050 | 0.88 | -0.8 | |
| 2,765,275 | - | BPHYT_RS32050 | 0.88 | +0.1 | |
| 2,765,279 | - | BPHYT_RS32050 | 0.89 | -0.2 | |
| 2,765,437 | - | -1.5 | |||
| 2,765,603 | - | +0.5 | |||
| 2,766,419 | - | BPHYT_RS32055 | 0.51 | -1.3 | |
| 2,766,419 | - | BPHYT_RS32055 | 0.51 | -2.4 |
Or see this region's nucleotide sequence