Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26695

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
1,556,313	+		BPHYT_RS26685	0.69	+0.7
1,556,611	+		BPHYT_RS26690	0.14	-1.8
1,556,854	+		BPHYT_RS26690	0.48	+0.3
1,556,855	-		BPHYT_RS26690	0.48	-1.4
1,556,860	+		BPHYT_RS26690	0.48	-0.6
1,556,860	+		BPHYT_RS26690	0.48	-2.3
1,556,860	+		BPHYT_RS26690	0.48	+1.6
1,558,287	+		BPHYT_RS26695	0.62	-0.4
1,558,287	+		BPHYT_RS26695	0.62	+2.6
1,558,671	+		BPHYT_RS26695	0.84	-0.1
1,558,672	-		BPHYT_RS26695	0.84	+0.9
1,558,806	-				-0.3
1,558,811	-				-1.0
1,558,998	+				+0.5
1,558,998	+				-0.2
1,559,027	+		BPHYT_RS26700	0.12	-0.2
1,559,056	+		BPHYT_RS26700	0.17	+0.3
1,559,064	+		BPHYT_RS26700	0.18	-1.1
1,559,145	+		BPHYT_RS26700	0.31	-0.1
1,559,159	-		BPHYT_RS26700	0.34	+1.3
1,559,183	-		BPHYT_RS26700	0.38	+0.8
1,559,199	-		BPHYT_RS26700	0.40	+2.2
1,559,492	-		BPHYT_RS26700	0.88	-0.4
1,559,680	+		BPHYT_RS26705	0.25	-0.4
1,559,681	-		BPHYT_RS26705	0.25	-0.4
1,559,881	-		BPHYT_RS26705	0.66	-0.2
1,559,883	+		BPHYT_RS26705	0.67	+1.2
1,559,884	-		BPHYT_RS26705	0.67	-0.2