Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26240

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
1,457,546	-				+1.0
1,457,546	-				-0.7
1,457,552	-				-0.6
1,457,552	-				-0.7
1,457,560	+		BPHYT_RS26235	0.11	+2.2
1,458,151	+				+0.5
1,458,240	-		BPHYT_RS26240	0.19	-0.1
1,458,240	-		BPHYT_RS26240	0.19	-0.7
1,458,240	-		BPHYT_RS26240	0.19	-0.8
1,458,240	-		BPHYT_RS26240	0.19	-0.0
1,458,394	+		BPHYT_RS26240	0.71	+1.0
1,458,465	-				-1.4
1,458,561	+				-0.5
1,458,659	-				+0.3
1,458,759	-				-0.3
1,459,059	-				-0.9
1,459,085	-				+0.5
1,459,085	-				+0.7
1,459,244	-		BPHYT_RS26250	0.31	-0.5
1,459,244	-		BPHYT_RS26250	0.31	-0.4
1,459,308	-		BPHYT_RS26250	0.47	-1.1
1,459,464	+		BPHYT_RS26250	0.84	-1.6
1,459,464	+		BPHYT_RS26250	0.84	-0.5
1,459,465	-		BPHYT_RS26250	0.84	-1.5
1,459,465	-		BPHYT_RS26250	0.84	-0.7
1,459,467	-		BPHYT_RS26250	0.85	-0.3