Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS22720
Experiment: 36hr PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO2 MOI 1 |
---|---|---|---|---|---|
remove | |||||
651,598 | - | BPHYT_RS22715 | 0.25 | -0.6 | |
651,598 | - | BPHYT_RS22715 | 0.25 | -0.9 | |
651,916 | - | BPHYT_RS22715 | 0.59 | -0.0 | |
651,916 | - | BPHYT_RS22715 | 0.59 | -0.6 | |
652,024 | - | BPHYT_RS22715 | 0.71 | -0.8 | |
652,408 | + | +0.6 | |||
652,411 | - | -0.9 | |||
652,411 | - | +0.1 | |||
652,760 | - | BPHYT_RS22720 | 0.29 | -0.2 | |
652,974 | + | BPHYT_RS22720 | 0.51 | -0.2 | |
652,975 | - | BPHYT_RS22720 | 0.51 | +0.3 | |
652,981 | - | BPHYT_RS22720 | 0.52 | -0.6 | |
653,091 | + | BPHYT_RS22720 | 0.63 | -0.8 | |
653,593 | - | -0.4 | |||
653,812 | - | -0.3 |
Or see this region's nucleotide sequence