Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19065

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
4,277,881	-		BPHYT_RS19060	0.10	-0.1
4,277,895	+		BPHYT_RS19060	0.12	-0.5
4,278,025	+		BPHYT_RS19060	0.26	-2.0
4,278,025	+		BPHYT_RS19060	0.26	-0.6
4,278,025	+		BPHYT_RS19060	0.26	-0.1
4,278,026	-		BPHYT_RS19060	0.27	-0.1
4,278,060	+		BPHYT_RS19060	0.30	+0.0
4,278,061	-		BPHYT_RS19060	0.30	-1.3
4,278,360	+		BPHYT_RS19060	0.64	-0.1
4,278,360	+		BPHYT_RS19060	0.64	-1.3
4,278,708	-				+0.3
4,278,708	-				+0.3
4,278,811	-				-0.1
4,278,811	-				+1.7
4,278,859	+				-0.5
4,278,860	-				-0.6
4,278,860	-				+0.6
4,278,860	-				-1.5
4,279,066	-		BPHYT_RS19065	0.42	+0.1
4,279,160	+		BPHYT_RS19065	0.58	-1.4
4,279,160	+		BPHYT_RS19065	0.58	+0.8
4,279,160	+		BPHYT_RS19065	0.58	-0.9
4,279,161	-		BPHYT_RS19065	0.58	-1.0
4,279,161	-		BPHYT_RS19065	0.58	-0.7
4,279,207	+		BPHYT_RS19065	0.66	+0.3
4,279,207	+		BPHYT_RS19065	0.66	+0.2
4,279,207	+		BPHYT_RS19065	0.66	-0.2
4,279,207	+		BPHYT_RS19065	0.66	+0.1
4,279,207	+		BPHYT_RS19065	0.66	+1.3
4,279,208	-		BPHYT_RS19065	0.66	-1.0
4,279,208	-		BPHYT_RS19065	0.66	-1.1
4,279,209	+		BPHYT_RS19065	0.66	+1.6
4,279,267	+		BPHYT_RS19065	0.76	-1.8
4,279,399	-				-0.2
4,279,435	+				+0.0
4,279,450	-				+0.3
4,279,496	-				+0.8
4,279,582	+				-1.3
4,279,620	+				+0.0
4,279,620	+				+0.5
4,279,620	+				+1.0
4,279,620	+				+0.1
4,279,621	-				+0.9
4,279,621	-				+1.0
4,279,621	-				-1.1
4,279,626	+				-1.6
4,279,627	-				-0.7
4,279,627	-				+0.0
4,279,793	+				-1.0
4,279,794	-				+0.3
4,279,972	+		BPHYT_RS19070	0.37	+0.6
4,279,972	+		BPHYT_RS19070	0.37	+0.3
4,279,973	-		BPHYT_RS19070	0.38	-0.3
4,280,038	+		BPHYT_RS19070	0.53	-1.2
4,280,041	-		BPHYT_RS19070	0.54	+1.1
4,280,041	-		BPHYT_RS19070	0.54	+1.4
4,280,098	+		BPHYT_RS19070	0.67	+1.3
4,280,098	+		BPHYT_RS19070	0.67	-0.0
4,280,099	-		BPHYT_RS19070	0.67	+0.5
4,280,236	+				-0.6
4,280,245	+				-1.3
4,280,245	+				-0.3
4,280,245	+				-0.7
4,280,260	+				-0.4
4,280,260	+				+1.0
4,280,263	+				-0.4
4,280,264	-				-0.0
4,280,298	+				-1.5
4,280,298	+				-0.3
4,280,304	+				+0.6
4,280,305	-				-1.1
4,280,305	-				+1.3
4,280,338	+				-0.8
4,280,338	+				+0.6
4,280,338	+				-0.0
4,280,339	-				-0.5