Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18635

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
4,190,066	-		BPHYT_RS18630	0.32	-1.2
4,190,475	+		BPHYT_RS18630	0.71	-1.3
4,190,703	+				+1.0
4,190,704	-				+1.2
4,190,704	-				+0.7
4,190,707	+				-2.3
4,190,708	-				-0.2
4,190,708	-				+0.4
4,190,782	+				-1.0
4,190,783	-				+0.1
4,191,122	+		BPHYT_RS18635	0.31	+2.0
4,191,137	+		BPHYT_RS18635	0.33	+1.6
4,191,138	-		BPHYT_RS18635	0.33	+1.0
4,191,774	-				+0.2
4,191,774	-				+0.7
4,191,774	-				+0.2
4,191,774	-				-0.5
4,191,785	+				-0.0
4,191,925	-				+1.5
4,191,925	-				+0.9
4,191,925	-				-0.6
4,191,969	+				-0.5
4,191,969	+				-0.1
4,192,088	-		BPHYT_RS18640	0.24	-0.1
4,192,214	+		BPHYT_RS18640	0.41	+1.4
4,192,215	-		BPHYT_RS18640	0.41	-0.7
4,192,215	-		BPHYT_RS18640	0.41	-1.0
4,192,215	-				+0.6