Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18625

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
4,188,156	+		BPHYT_RS18615	0.70	-0.4
4,188,159	+		BPHYT_RS18615	0.70	-2.5
4,188,220	-		BPHYT_RS18615	0.81	-0.2
4,188,220	-		BPHYT_RS18615	0.81	+0.2
4,188,248	-		BPHYT_RS18615	0.87	-0.6
4,188,330	-				+1.0
4,188,365	+				-0.9
4,188,367	+				-1.8
4,188,368	-				-1.1
4,188,578	-		BPHYT_RS18620	0.42	-0.2
4,188,578	-		BPHYT_RS18620	0.42	+1.6
4,188,582	-		BPHYT_RS18620	0.42	+0.0
4,188,588	+		BPHYT_RS18620	0.44	+1.0
4,188,592	+		BPHYT_RS18620	0.44	+1.0
4,188,612	-		BPHYT_RS18620	0.48	+0.6
4,188,723	+		BPHYT_RS18620	0.70	+2.6
4,188,724	-		BPHYT_RS18620	0.70	+0.6
4,188,921	-				-0.4
4,188,990	-				-0.4
4,188,995	-				-1.6
4,189,076	+				+0.4
4,189,093	+				-0.3
4,189,093	+				-0.9
4,189,094	-				-0.0
4,189,094	-				-1.6
4,189,122	+				+1.3
4,189,123	-				-1.5
4,189,454	+		BPHYT_RS18625	0.57	-2.3
4,189,455	-		BPHYT_RS18625	0.57	+0.2
4,189,455	-		BPHYT_RS18625	0.57	-0.9
4,189,493	+		BPHYT_RS18625	0.63	-1.5
4,189,493	+		BPHYT_RS18625	0.63	+0.3
4,189,494	-		BPHYT_RS18625	0.63	-1.5
4,189,523	-		BPHYT_RS18625	0.67	+1.6
4,189,523	-		BPHYT_RS18625	0.67	+0.5
4,189,726	-				-0.3
4,190,066	-		BPHYT_RS18630	0.32	-1.2
4,190,475	+		BPHYT_RS18630	0.71	-1.3
4,190,703	+				+1.0
4,190,704	-				+1.2
4,190,704	-				+0.7
4,190,707	+				-2.3
4,190,708	-				-0.2
4,190,708	-				+0.4