Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15240

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,464,584	+				+0.1
3,464,585	-				-0.9
3,464,711	+		BPHYT_RS15235	0.50	-0.9
3,464,712	-		BPHYT_RS15235	0.51	-2.0
3,464,712	-		BPHYT_RS15235	0.51	+0.0
3,464,713	+		BPHYT_RS15235	0.51	-2.7
3,464,912	+				-0.8
3,464,939	-				-0.3
3,465,058	+				+0.9
3,465,268	+				+0.4
3,465,268	+				-0.9
3,465,456	-		BPHYT_RS15240	0.14	-0.0
3,465,467	-		BPHYT_RS15240	0.15	-0.3
3,465,578	-		BPHYT_RS15240	0.19	-0.2
3,465,589	+		BPHYT_RS15240	0.19	-0.0
3,465,700	+		BPHYT_RS15240	0.23	-0.4
3,465,700	+		BPHYT_RS15240	0.23	-2.0
3,465,788	-		BPHYT_RS15240	0.27	-2.7
3,465,847	+		BPHYT_RS15240	0.29	-1.2
3,465,848	-		BPHYT_RS15240	0.29	-0.2
3,465,878	-		BPHYT_RS15240	0.30	-0.7
3,465,972	+		BPHYT_RS15240	0.33	-1.6
3,465,972	+		BPHYT_RS15240	0.33	-0.5
3,465,973	-		BPHYT_RS15240	0.33	-0.2
3,466,236	+		BPHYT_RS15240	0.43	-0.4
3,466,236	+		BPHYT_RS15240	0.43	+1.9
3,466,237	-		BPHYT_RS15240	0.43	+0.2
3,466,237	-		BPHYT_RS15240	0.43	-0.2
3,466,328	-		BPHYT_RS15240	0.47	+0.4
3,466,426	+		BPHYT_RS15240	0.50	-0.0
3,466,426	+		BPHYT_RS15240	0.50	-0.1
3,466,426	+		BPHYT_RS15240	0.50	-1.8
3,466,426	+		BPHYT_RS15240	0.50	-0.5
3,466,426	+		BPHYT_RS15240	0.50	-0.1
3,466,426	+		BPHYT_RS15240	0.50	-2.2
3,466,426	+		BPHYT_RS15240	0.50	-0.8
3,466,426	+		BPHYT_RS15240	0.50	-2.3
3,466,426	+		BPHYT_RS15240	0.50	+0.5
3,466,427	-		BPHYT_RS15240	0.50	+0.9
3,466,427	-		BPHYT_RS15240	0.50	+0.2
3,466,427	-		BPHYT_RS15240	0.50	-0.1
3,466,427	-		BPHYT_RS15240	0.50	+2.5
3,466,430	+		BPHYT_RS15240	0.50	-1.7
3,467,042	-		BPHYT_RS15240	0.73	+0.1
3,467,042	-		BPHYT_RS15240	0.73	-1.8
3,467,190	-		BPHYT_RS15240	0.79	+0.1
3,467,190	-		BPHYT_RS15240	0.79	-1.1
3,467,242	+		BPHYT_RS15240	0.81	+0.7
3,467,390	-		BPHYT_RS15240	0.86	+0.1
3,467,489	+		BPHYT_RS15240	0.90	-1.9
3,467,490	-		BPHYT_RS15240	0.90	+0.2
3,467,490	-		BPHYT_RS15240	0.90	-0.6
3,467,490	-		BPHYT_RS15240	0.90	+0.2
3,467,491	+		BPHYT_RS15240	0.90	+0.2
3,467,491	+		BPHYT_RS15240	0.90	+0.1
3,467,491	+		BPHYT_RS15240	0.90	-1.1
3,467,491	+		BPHYT_RS15240	0.90	+0.5
3,467,491	-		BPHYT_RS15240	0.90	+0.6
3,467,492	-				-0.0
3,467,492	-				-0.2
3,467,492	-				-0.8
3,467,492	-				-0.2
3,467,492	-				+0.8
3,467,492	-				-0.9
3,467,492	-				-0.3
3,467,492	-				-0.9
3,467,493	+				+0.2
3,467,493	+				-0.3
3,467,581	-				-0.4
3,467,735	-				-0.6
3,467,805	+				+0.9
3,467,806	-				-1.6
3,467,829	-				-1.8
3,467,829	-				+0.0