Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15050

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,423,389	+				-0.5
3,423,390	-				-0.3
3,423,714	+		BPHYT_RS15050	0.12	-0.4
3,423,715	-		BPHYT_RS15050	0.12	-1.2
3,423,806	+		BPHYT_RS15050	0.17	-1.3
3,423,911	+		BPHYT_RS15050	0.23	-0.7
3,423,911	+		BPHYT_RS15050	0.23	-0.5
3,423,923	+		BPHYT_RS15050	0.24	+0.3
3,424,052	+		BPHYT_RS15050	0.31	-0.5
3,424,053	-		BPHYT_RS15050	0.31	+2.7
3,424,134	-		BPHYT_RS15050	0.36	-0.9
3,424,424	-		BPHYT_RS15050	0.52	-3.5
3,424,626	-		BPHYT_RS15050	0.64	+0.0
3,424,626	-		BPHYT_RS15050	0.64	-0.1
3,424,944	-		BPHYT_RS15050	0.82	-0.4
3,425,008	-		BPHYT_RS15050	0.86	-1.9
3,425,123	+				-2.2
3,425,263	+				-2.5
3,425,264	-				-1.2
3,425,264	-				+0.1
3,425,300	+				+0.0
3,425,346	-				-1.5
3,425,346	-				-2.3
3,425,492	+				+0.2
3,425,492	+				-0.3
3,425,492	+				+0.2
3,425,493	-				-0.4
3,425,757	+		BPHYT_RS15055	0.42	+1.8
3,426,124	+				+0.3
3,426,145	-				-1.7
3,426,145	-				-1.0