Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14115

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,222,930	-		BPHYT_RS14110	0.62	-1.5
3,223,040	+		BPHYT_RS14110	0.67	-0.8
3,223,040	+		BPHYT_RS14110	0.67	+2.6
3,223,040	+		BPHYT_RS14110	0.67	-0.3
3,223,040	+		BPHYT_RS14110	0.67	-1.7
3,223,041	-		BPHYT_RS14110	0.67	-1.1
3,223,122	+		BPHYT_RS14110	0.71	+0.8
3,223,122	+		BPHYT_RS14110	0.71	+1.2
3,223,123	-		BPHYT_RS14110	0.71	-1.2
3,223,311	-		BPHYT_RS14110	0.80	-0.1
3,223,311	-		BPHYT_RS14110	0.80	+0.4
3,223,457	+				+1.3
3,223,482	-		BPHYT_RS14110	0.89	-0.4
3,223,713	-				-0.8
3,223,795	+				-2.1
3,223,849	-				-1.2
3,223,999	-		BPHYT_RS14115	0.14	-0.9
3,224,124	+		BPHYT_RS14115	0.24	-1.2
3,224,474	-		BPHYT_RS14115	0.50	+0.2
3,224,898	+		BPHYT_RS14115	0.82	-2.0
3,224,898	+		BPHYT_RS14115	0.82	-0.3
3,224,899	-		BPHYT_RS14115	0.83	+0.4
3,225,153	+				-1.1
3,225,291	+				+0.0
3,225,291	+				+1.6
3,225,336	+		BPHYT_RS14120	0.14	-0.9
3,225,336	+		BPHYT_RS14120	0.14	-0.0
3,225,638	+		BPHYT_RS14120	0.57	+0.4
3,225,714	+		BPHYT_RS14120	0.67	-1.1
3,225,845	+		BPHYT_RS14120	0.86	-0.2
3,225,846	-		BPHYT_RS14120	0.86	-0.7
3,225,971	-				+0.9
3,226,036	+				-2.1