Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13815

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,150,106	+				-0.2
3,150,111	-				-0.6
3,150,137	+				+0.8
3,150,225	+				+0.5
3,150,225	+				+2.2
3,150,225	+				+0.1
3,150,459	+				-2.4
3,150,753	+				-0.4
3,150,754	-				+1.4
3,150,867	-		BPHYT_RS13815	0.29	-0.2
3,150,924	-		BPHYT_RS13815	0.52	-0.7
3,150,953	-		BPHYT_RS13815	0.64	-0.5
3,150,953	-		BPHYT_RS13815	0.64	-1.3
3,151,037	+				+0.9
3,151,038	-				+1.6
3,151,225	-				+1.2
3,151,515	-		BPHYT_RS13820	0.25	+0.6