Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13115

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,996,103	+		BPHYT_RS13110	0.29	+1.2
2,996,104	-		BPHYT_RS13110	0.30	+1.7
2,996,104	-		BPHYT_RS13110	0.30	+1.5
2,996,158	-		BPHYT_RS13110	0.35	+0.4
2,996,211	+		BPHYT_RS13110	0.39	-1.7
2,996,317	-		BPHYT_RS13110	0.49	-1.5
2,996,484	+		BPHYT_RS13110	0.64	+0.1
2,996,485	-		BPHYT_RS13110	0.65	-0.9
2,996,784	+				+0.2
2,997,029	+		BPHYT_RS13115	0.20	-0.4
2,997,030	-		BPHYT_RS13115	0.20	-1.1
2,997,560	+		BPHYT_RS13115	0.84	-0.9
2,997,560	+		BPHYT_RS13115	0.84	-0.9
2,997,561	-		BPHYT_RS13115	0.84	+0.1
2,997,910	+		BPHYT_RS13120	0.19	+0.2
2,997,910	+		BPHYT_RS13120	0.19	-0.5
2,997,971	-		BPHYT_RS13120	0.26	-0.1
2,998,160	-		BPHYT_RS13120	0.47	-0.1
2,998,475	-		BPHYT_RS13120	0.82	-0.4
2,998,475	-		BPHYT_RS13120	0.82	+0.2
2,998,542	-		BPHYT_RS13120	0.89	-1.4