Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13080

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,989,328	+		BPHYT_RS13070	0.85	-0.0
2,989,328	+				+2.3
2,989,705	-				+0.9
2,989,928	+		BPHYT_RS13075	0.52	-0.9
2,989,962	+		BPHYT_RS13075	0.59	-1.5
2,990,023	-		BPHYT_RS13075	0.71	-1.0
2,990,023	-		BPHYT_RS13075	0.71	-0.5
2,990,082	+		BPHYT_RS13075	0.82	+0.5
2,990,413	+		BPHYT_RS13080	0.35	-0.7
2,990,417	-		BPHYT_RS13080	0.36	-1.4
2,990,869	-				-1.0
2,990,869	-				-0.5
2,990,964	+				+0.6
2,991,146	+		BPHYT_RS13085	0.42	+1.0
2,991,313	+				-0.0
2,991,313	+				+0.6
2,991,313	+				+0.4
2,991,313	+				+0.6
2,991,314	-				-0.4
2,991,314	-				+0.0
2,991,314	-				+1.1
2,991,314	-				+0.9
2,991,314	-				+1.4
2,991,317	+				-0.7
2,991,317	+				-0.4
2,991,317	+				-1.1
2,991,318	-				-0.3
2,991,318	-				+0.3
2,991,431	+				-0.2
2,991,432	-				-0.3
2,991,432	-				-0.6
2,991,432	-				+0.3
2,991,599	+				+2.6
2,991,600	-				-0.4
2,991,791	-				-0.8
2,991,811	+				+0.8