Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12855

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,932,119	+				+2.4
2,932,119	+				+0.5
2,932,119	+				+1.3
2,932,120	-				+2.2
2,932,125	+				+3.1
2,932,763	-				+1.3
2,932,854	-				-0.0
2,932,892	+				+0.2
2,933,228	+		BPHYT_RS12855	0.68	-0.7
2,933,307	-				+3.3
2,933,308	+				+2.3
2,933,308	+				+0.2
2,933,309	-				+0.7
2,933,340	-				+0.1
2,933,389	+				-2.1
2,933,390	-				+0.4
2,933,649	+		BPHYT_RS12860	0.29	+0.2
2,933,649	+		BPHYT_RS12860	0.29	-0.1
2,933,650	-		BPHYT_RS12860	0.29	+0.4
2,933,650	-		BPHYT_RS12860	0.29	+0.2
2,933,650	-		BPHYT_RS12860	0.29	+0.6
2,933,650	-		BPHYT_RS12860	0.29	+0.4
2,933,650	-		BPHYT_RS12860	0.29	-0.1
2,933,650	-		BPHYT_RS12860	0.29	+0.8
2,933,650	-		BPHYT_RS12860	0.29	-1.0
2,933,774	-		BPHYT_RS12860	0.42	+3.0
2,933,774	-		BPHYT_RS12860	0.42	-0.3
2,933,774	-		BPHYT_RS12860	0.42	+4.5
2,933,880	+		BPHYT_RS12860	0.53	+0.8
2,933,880	+		BPHYT_RS12860	0.53	+0.1
2,933,880	+		BPHYT_RS12860	0.53	+0.2
2,933,895	+		BPHYT_RS12860	0.55	-0.1
2,933,922	+		BPHYT_RS12860	0.58	-1.8
2,933,923	-		BPHYT_RS12860	0.58	+0.6
2,934,120	+		BPHYT_RS12860	0.79	-1.8
2,934,120	+		BPHYT_RS12860	0.79	-0.8
2,934,121	-		BPHYT_RS12860	0.79	+0.4
2,934,121	-		BPHYT_RS12860	0.79	+0.2
2,934,177	+		BPHYT_RS12860	0.85	+0.7
2,934,177	+		BPHYT_RS12860	0.85	-1.1