Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11265

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,559,423	+		BPHYT_RS11260	0.56	+0.4
2,559,509	+		BPHYT_RS11260	0.66	-0.4
2,559,510	-		BPHYT_RS11260	0.66	-0.4
2,559,618	-		BPHYT_RS11260	0.78	+0.7
2,559,841	-				-0.7
2,559,856	-				+0.6
2,559,856	-				-0.8
2,559,869	+				+1.0
2,559,883	+				-0.8
2,559,886	+				+1.6
2,559,886	+				-1.1
2,559,886	+				+0.1
2,559,887	-				-0.3
2,559,887	-				+0.6
2,559,889	+				-2.8
2,560,029	-				-0.1
2,560,316	-		BPHYT_RS11265	0.59	-1.8
2,560,526	-				+0.1
2,560,526	-				-1.8
2,560,530	-				+0.6
2,560,581	+				+1.5
2,561,033	+		BPHYT_RS11270	0.47	-1.3
2,561,033	+		BPHYT_RS11270	0.47	-0.4
2,561,034	-		BPHYT_RS11270	0.47	-0.8
2,561,246	+				-1.0
2,561,247	-				-2.6
2,561,370	+		BPHYT_RS11275	0.17	-2.0
2,561,370	+		BPHYT_RS11275	0.17	+1.8
2,561,371	-		BPHYT_RS11275	0.17	+0.5
2,561,515	+		BPHYT_RS11275	0.56	-0.1