Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10625

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,421,053	+		BPHYT_RS10620	0.62	-1.3
2,421,107	-		BPHYT_RS10620	0.67	-0.7
2,421,129	-		BPHYT_RS10620	0.68	+1.6
2,421,175	+		BPHYT_RS10620	0.72	-0.1
2,421,247	+		BPHYT_RS10620	0.78	-1.5
2,421,320	+		BPHYT_RS10620	0.84	+0.1
2,421,561	-				+0.5
2,421,853	+		BPHYT_RS10625	0.24	-1.4
2,422,287	-		BPHYT_RS10625	0.71	+1.3
2,422,489	-				-0.9
2,422,941	+		BPHYT_RS10630	0.38	-1.4
2,422,941	+		BPHYT_RS10630	0.38	-2.4
2,422,942	-		BPHYT_RS10630	0.38	-1.1
2,423,157	+		BPHYT_RS10630	0.67	-1.1
2,423,415	-				-1.0
2,423,495	+				-0.4
2,423,496	-				+0.8
2,423,496	-				-0.5
2,423,500	-				-0.6
2,423,536	-				+0.4
2,423,540	-				+0.4