Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10615

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,418,836	-		BPHYT_RS10610	0.38	-0.2
2,418,936	+		BPHYT_RS10610	0.49	+0.2
2,418,936	+		BPHYT_RS10610	0.49	-0.4
2,418,937	-		BPHYT_RS10610	0.49	+0.7
2,419,395	+				-0.6
2,419,410	+				-0.5
2,419,411	-				-0.2
2,419,467	-				-0.5
2,419,505	+				+0.9
2,419,736	+		BPHYT_RS10615	0.39	-1.0
2,419,746	-		BPHYT_RS10615	0.40	-0.4
2,419,746	-		BPHYT_RS10615	0.40	+0.0
2,421,053	+		BPHYT_RS10620	0.62	-1.3
2,421,107	-		BPHYT_RS10620	0.67	-0.7
2,421,129	-		BPHYT_RS10620	0.68	+1.6
2,421,175	+		BPHYT_RS10620	0.72	-0.1