Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10425

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,368,825	-		BPHYT_RS10420	0.41	-0.7
2,368,973	-		BPHYT_RS10420	0.50	-1.1
2,369,426	-		BPHYT_RS10420	0.80	+1.0
2,370,020	+		BPHYT_RS10425	0.26	+0.6
2,370,021	-		BPHYT_RS10425	0.26	-0.7
2,370,159	+		BPHYT_RS10425	0.43	-2.5
2,370,419	+		BPHYT_RS10425	0.74	-2.2
2,370,507	+		BPHYT_RS10425	0.85	-2.3
2,370,508	-		BPHYT_RS10425	0.85	-0.1
2,370,527	+		BPHYT_RS10425	0.87	+0.3
2,370,596	+				-1.2
2,370,597	-				+0.6
2,370,659	-				+1.0
2,370,674	-				+0.9
2,370,689	-				-0.1
2,371,277	-		BPHYT_RS10430	0.58	-0.4
2,371,372	+		BPHYT_RS10430	0.66	-1.1
2,371,603	-		BPHYT_RS10430	0.87	-1.5