Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35605

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,580,447	+		BPHYT_RS35600	0.51	+0.5
3,580,781	+		BPHYT_RS35600	0.75	-1.1
3,580,781	+		BPHYT_RS35600	0.75	-0.2
3,580,782	-		BPHYT_RS35600	0.75	-0.1
3,580,793	-		BPHYT_RS35600	0.76	+4.9
3,580,886	+		BPHYT_RS35600	0.82	-2.6
3,580,930	+		BPHYT_RS35600	0.85	+0.9
3,580,930	+		BPHYT_RS35600	0.85	+0.3
3,580,930	+		BPHYT_RS35600	0.85	-2.0
3,580,931	-		BPHYT_RS35600	0.85	-1.5
3,581,069	-				+0.0
3,581,117	+				-0.7
3,581,173	+				-1.9
3,581,173	+				+1.8
3,581,173	+				-0.7
3,581,174	-				-0.1
3,581,592	+		BPHYT_RS35605	0.38	-0.1
3,581,958	+		BPHYT_RS35605	0.77	-1.0
3,581,958	+		BPHYT_RS35605	0.77	+0.0
3,582,058	-		BPHYT_RS35605	0.87	-1.7
3,582,279	-				-1.0
3,582,279	-				+1.8
3,582,289	-				+0.0
3,582,298	+				+0.3
3,582,470	-				+0.1
3,582,476	-				-2.1
3,582,588	+		BPHYT_RS35610	0.15	-0.7
3,582,627	-		BPHYT_RS35610	0.17	+0.4
3,583,026	+		BPHYT_RS35610	0.37	+1.5
3,583,169	+		BPHYT_RS35610	0.45	-0.3