Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35490

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,563,179	+		BPHYT_RS35485	0.72	-0.2
3,563,179	+		BPHYT_RS35485	0.72	-0.5
3,563,278	+		BPHYT_RS35485	0.79	+0.5
3,563,345	-		BPHYT_RS35485	0.84	+0.5
3,563,345	-		BPHYT_RS35485	0.84	+0.3
3,563,814	+				-2.2
3,563,951	+		BPHYT_RS35490	0.17	+0.1
3,563,951	+		BPHYT_RS35490	0.17	-1.1
3,563,993	+		BPHYT_RS35490	0.24	-0.9
3,563,994	-		BPHYT_RS35490	0.25	-0.3
3,564,016	+		BPHYT_RS35490	0.29	+0.7
3,564,016	+		BPHYT_RS35490	0.29	-0.0
3,564,017	-		BPHYT_RS35490	0.29	-1.7
3,564,262	+		BPHYT_RS35490	0.72	+0.2
3,564,472	+				-0.5
3,564,714	-				-0.5
3,564,998	-		BPHYT_RS35495	0.63	-0.2
3,565,362	+		BPHYT_RS35500	0.12	-0.2
3,565,363	-		BPHYT_RS35500	0.12	-0.1
3,565,363	-		BPHYT_RS35500	0.12	-0.7