Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34570

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,360,746	+		BPHYT_RS34560	0.59	+0.3
3,360,746	+		BPHYT_RS34560	0.59	-0.2
3,360,747	-		BPHYT_RS34560	0.59	-1.9
3,360,747	-		BPHYT_RS34560	0.59	-0.1
3,361,114	+		BPHYT_RS34565	0.20	+0.5
3,361,425	-		BPHYT_RS34565	0.62	-0.9
3,361,688	-				-0.5
3,361,688	-				-1.3
3,361,731	-				+0.0
3,361,896	+				+1.5
3,361,897	-				-0.2
3,361,897	-				+0.0
3,361,897	-				-1.3
3,361,897	-				-0.9
3,362,304	-		BPHYT_RS34570	0.23	-1.6
3,362,841	-		BPHYT_RS34570	0.46	-0.6
3,363,521	-		BPHYT_RS34570	0.74	-0.3
3,363,712	+		BPHYT_RS34570	0.82	+0.8
3,363,713	-		BPHYT_RS34570	0.82	+0.4
3,363,779	-		BPHYT_RS34570	0.85	-0.4
3,363,779	-		BPHYT_RS34570	0.85	+1.6
3,364,020	+				-0.6
3,364,066	+				+1.6
3,364,130	+				-0.6
3,364,192	+				-0.5
3,364,228	+				-0.0
3,364,244	+				-0.1
3,364,330	-				+0.0
3,364,438	-				-1.3