Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33430

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,084,303	+				-2.4
3,084,327	+				-0.1
3,084,330	+				+0.2
3,085,051	+		BPHYT_RS33425	0.73	-1.2
3,085,052	-		BPHYT_RS33425	0.73	+0.4
3,085,064	-		BPHYT_RS33425	0.75	-0.1
3,085,223	-				+1.0
3,085,223	-				-0.3
3,085,295	-				-2.0
3,085,398	-				-0.4
3,085,757	-		BPHYT_RS33430	0.17	-0.8
3,085,886	+		BPHYT_RS33430	0.21	-1.8
3,086,019	+		BPHYT_RS33430	0.25	-2.9
3,086,020	-		BPHYT_RS33430	0.25	-0.2
3,086,232	+		BPHYT_RS33430	0.33	-1.3
3,086,242	+		BPHYT_RS33430	0.33	+1.5
3,086,249	-		BPHYT_RS33430	0.33	-1.1
3,086,547	+		BPHYT_RS33430	0.43	-1.0
3,087,309	+		BPHYT_RS33430	0.68	+0.8
3,087,310	-		BPHYT_RS33430	0.68	-1.9
3,087,519	+		BPHYT_RS33430	0.75	+0.4
3,087,520	-		BPHYT_RS33430	0.75	-0.2
3,087,873	+		BPHYT_RS33430	0.87	-0.0
3,087,874	-		BPHYT_RS33430	0.87	-1.9
3,088,060	-				-1.1
3,088,297	-				-0.8
3,088,297	-				+0.4
3,088,417	-		BPHYT_RS33435	0.12	-0.1
3,088,495	-		BPHYT_RS33435	0.19	-0.8
3,088,495	-		BPHYT_RS33435	0.19	-1.0
3,088,664	-		BPHYT_RS33435	0.36	+0.7
3,088,670	+		BPHYT_RS33435	0.36	+0.4
3,088,670	+		BPHYT_RS33435	0.36	-0.5
3,088,671	-		BPHYT_RS33435	0.36	-0.1
3,088,671	-		BPHYT_RS33435	0.36	-0.2
3,088,671	-		BPHYT_RS33435	0.36	+0.0
3,089,089	-		BPHYT_RS33435	0.76	-1.2
3,089,089	-		BPHYT_RS33435	0.76	-3.0