Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33185

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,022,243	-				-0.2
3,022,300	-				-1.2
3,022,309	+				-3.1
3,022,445	+				-0.6
3,022,445	+				-2.5
3,022,461	-				-0.8
3,022,462	+				-1.0
3,022,463	-				-1.6
3,022,540	-				+1.2
3,022,763	+				-1.4
3,022,922	+				-3.0
3,023,271	+		BPHYT_RS33185	0.34	-3.1
3,023,273	+		BPHYT_RS33185	0.34	-2.0
3,023,273	+		BPHYT_RS33185	0.34	-1.1
3,023,500	+		BPHYT_RS33185	0.82	-2.4
3,023,564	+				-2.8
3,023,609	-				-1.4
3,023,609	-				-1.1
3,023,766	+				-1.5
3,023,767	-				+0.2
3,023,887	-				-1.5
3,024,006	+				-0.5
3,024,007	-				-0.3
3,024,029	+				+0.0
3,024,052	-				-0.3
3,024,137	+				-1.5
3,024,144	-				-2.3
3,024,257	+				-3.9
3,024,258	-				+2.7
3,024,275	+				-0.7
3,024,275	+				-1.9
3,024,275	+				-1.4
3,024,277	+				-0.3
3,024,277	+				-1.3
3,024,316	+				+0.0
3,024,316	+				-0.6
3,024,317	-				-0.3
3,024,458	+				-0.0
3,024,458	+				+1.0
3,024,511	+				+0.7