Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29950

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,272,932	+		BPHYT_RS29945	0.61	+0.1
2,273,391	-				+0.3
2,273,440	+				+0.5
2,273,598	+				+0.8
2,273,599	-				+0.4
2,273,861	+		BPHYT_RS29950	0.40	-1.5
2,274,229	-				+0.4
2,274,425	+				+0.4
2,274,425	+				-0.0
2,274,426	-				+0.4
2,274,592	-				-1.2
2,274,758	-		BPHYT_RS29955	0.18	-1.3
2,274,761	+		BPHYT_RS29955	0.18	+0.2
2,274,761	+		BPHYT_RS29955	0.18	-0.9
2,274,762	-		BPHYT_RS29955	0.18	+0.4
2,274,762	-		BPHYT_RS29955	0.18	-1.8
2,274,882	-		BPHYT_RS29955	0.31	+0.6
2,275,013	+		BPHYT_RS29955	0.46	+1.2
2,275,014	-		BPHYT_RS29955	0.46	-1.1
2,275,014	-		BPHYT_RS29955	0.46	+0.6
2,275,015	-		BPHYT_RS29955	0.46	+1.7