Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29940

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,267,968	+		BPHYT_RS29930	0.54	-0.4
2,268,237	-		BPHYT_RS29930	0.73	-1.1
2,268,237	-		BPHYT_RS29930	0.73	-1.1
2,268,239	+		BPHYT_RS29930	0.73	-0.1
2,268,239	+		BPHYT_RS29930	0.73	+0.1
2,268,239	+		BPHYT_RS29930	0.73	+0.5
2,268,240	-		BPHYT_RS29930	0.73	+1.0
2,268,240	-		BPHYT_RS29930	0.73	+0.1
2,268,293	+		BPHYT_RS29930	0.77	-1.0
2,268,315	-		BPHYT_RS29930	0.78	+0.2
2,268,315	-		BPHYT_RS29930	0.78	-0.3
2,268,446	+		BPHYT_RS29930	0.88	-0.3
2,268,531	+				-2.7
2,268,684	+		BPHYT_RS29935	0.45	-0.1
2,268,684	+		BPHYT_RS29935	0.45	+0.1
2,268,684	+		BPHYT_RS29935	0.45	-0.4
2,268,685	-		BPHYT_RS29935	0.46	-0.1
2,268,685	-		BPHYT_RS29935	0.46	-0.1
2,268,685	-		BPHYT_RS29935	0.46	-0.8
2,268,720	-		BPHYT_RS29935	0.74	+0.2
2,268,874	-				+0.5
2,269,341	+		BPHYT_RS29940	0.17	-0.4
2,269,461	-		BPHYT_RS29940	0.21	+0.6
2,269,461	-		BPHYT_RS29940	0.21	+0.4
2,269,693	+		BPHYT_RS29940	0.29	+0.8
2,269,695	+		BPHYT_RS29940	0.29	-0.8
2,269,695	+		BPHYT_RS29940	0.29	-1.3
2,269,696	-		BPHYT_RS29940	0.29	+2.4
2,269,696	-		BPHYT_RS29940	0.29	+2.4
2,269,975	+		BPHYT_RS29940	0.38	-2.4
2,269,976	-		BPHYT_RS29940	0.38	+0.8
2,270,043	+		BPHYT_RS29940	0.41	-1.1
2,270,558	-		BPHYT_RS29940	0.59	-0.0
2,270,793	+		BPHYT_RS29940	0.67	-0.4
2,270,814	+		BPHYT_RS29940	0.67	+1.4
2,270,815	-		BPHYT_RS29940	0.67	+0.7
2,271,713	-				-0.9
2,271,740	-				-0.5
2,271,841	+				+0.8
2,271,855	+				-1.2
2,271,998	-				-1.1
2,272,476	+		BPHYT_RS29945	0.24	-0.5