Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29415

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,153,842	-		BPHYT_RS29410	0.50	+1.2
2,154,229	-		BPHYT_RS29410	0.80	+1.1
2,154,394	+				+0.5
2,154,394	+				-0.3
2,154,484	+				-1.1
2,154,484	+				-0.8
2,154,710	-		BPHYT_RS29415	0.23	-1.4
2,155,408	+				+1.5
2,155,409	-				-0.1
2,155,505	-				-0.2
2,155,505	-				-0.1
2,155,654	+		BPHYT_RS29420	0.27	-1.5
2,155,688	-		BPHYT_RS29420	0.32	+0.6
2,155,688	-		BPHYT_RS29420	0.32	-0.7
2,156,159	+				+1.0
2,156,286	+				+0.1