Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29085

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,078,921	-		BPHYT_RS29080	0.13	+1.1
2,079,195	-		BPHYT_RS29080	0.43	+0.6
2,079,256	-		BPHYT_RS29080	0.49	-1.2
2,079,613	+		BPHYT_RS29080	0.88	-0.1
2,079,614	-		BPHYT_RS29080	0.88	+1.3
2,079,614	-		BPHYT_RS29080	0.88	+0.9
2,079,614	-		BPHYT_RS29080	0.88	-2.1
2,079,632	-				+0.0
2,080,466	+		BPHYT_RS29085	0.67	-1.3
2,080,466	+		BPHYT_RS29085	0.67	+0.1
2,080,470	+		BPHYT_RS29085	0.68	-0.4
2,080,690	+				+0.4
2,080,691	-				-1.7
2,080,798	+				+1.2
2,080,799	-				+0.8
2,081,217	+		BPHYT_RS29090	0.45	+1.0
2,081,218	-		BPHYT_RS29090	0.46	+0.7
2,081,703	+				+1.7
2,081,704	-				-2.4