Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29060

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,074,117	+				+0.1
2,074,688	-				+3.4
2,074,741	+				-0.6
2,074,902	-				-2.4
2,074,902	-				-0.3
2,074,902	-				-0.9
2,075,147	+		BPHYT_RS29060	0.29	+1.2
2,075,631	+		BPHYT_RS29060	0.79	+0.6
2,075,633	+		BPHYT_RS29060	0.79	-1.2
2,075,682	-		BPHYT_RS29060	0.84	-1.1
2,076,303	-		BPHYT_RS29065	0.14	-1.1
2,076,572	+		BPHYT_RS29065	0.54	+0.0
2,076,651	-		BPHYT_RS29065	0.66	-0.6
2,076,830	+				-1.5