Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29005

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,061,736	+		BPHYT_RS28995	0.88	+2.4
2,061,737	-		BPHYT_RS28995	0.88	+0.1
2,061,785	-				+1.0
2,061,888	+				-0.9
2,061,928	-				-1.0
2,063,094	+		BPHYT_RS29005	0.15	-1.4
2,063,500	-		BPHYT_RS29005	0.28	-0.6
2,063,695	-		BPHYT_RS29005	0.34	-2.7
2,064,607	-		BPHYT_RS29005	0.63	-1.4
2,064,962	+		BPHYT_RS29005	0.74	+0.3
2,065,348	-		BPHYT_RS29005	0.87	-2.0
2,065,663	-				-0.3