Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28715

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
1,995,301	+		BPHYT_RS28710	0.56	-1.8
1,995,387	-		BPHYT_RS28710	0.62	+0.4
1,995,521	+		BPHYT_RS28710	0.71	+0.2
1,995,596	+		BPHYT_RS28710	0.76	-1.1
1,995,597	-		BPHYT_RS28710	0.76	+1.8
1,995,754	-		BPHYT_RS28710	0.87	+0.4
1,995,778	-		BPHYT_RS28710	0.89	+0.6
1,995,850	+				-0.0
1,995,851	-				+0.4
1,996,034	+				+0.6
1,996,035	-				+0.6
1,996,043	+				+0.6
1,996,044	-				+0.6
1,996,293	+		BPHYT_RS28715	0.54	-0.9
1,996,300	-		BPHYT_RS28715	0.55	-0.7
1,996,300	-		BPHYT_RS28715	0.55	-2.1
1,996,595	+				-0.7
1,996,596	-				-1.8
1,996,647	+				-0.4
1,996,648	-				-0.8
1,996,854	+		BPHYT_RS28720	0.26	-0.7
1,997,099	+		BPHYT_RS28720	0.55	+1.4
1,997,100	-		BPHYT_RS28720	0.55	-2.0
1,997,105	+		BPHYT_RS28720	0.56	+0.4
1,997,401	+				-1.3