Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26730

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
1,565,235	+		BPHYT_RS26725	0.34	+0.5
1,565,236	-		BPHYT_RS26725	0.34	+0.3
1,565,236	-		BPHYT_RS26725	0.34	-2.1
1,565,236	-		BPHYT_RS26725	0.34	-0.0
1,565,542	-		BPHYT_RS26725	0.58	-0.1
1,565,911	+		BPHYT_RS26725	0.86	+2.2
1,565,990	+				+2.4
1,565,990	+				+1.6
1,566,118	-				+0.9
1,566,187	-				-1.1
1,566,187	-				+1.4
1,566,339	+				-1.0
1,566,830	+		BPHYT_RS26730	0.31	-1.9
1,566,943	-		BPHYT_RS26730	0.37	+0.4
1,567,068	+		BPHYT_RS26730	0.43	+2.4
1,567,068	+		BPHYT_RS26730	0.43	-0.2
1,567,148	+		BPHYT_RS26730	0.47	-0.3
1,567,210	-		BPHYT_RS26730	0.50	+1.4
1,567,244	-		BPHYT_RS26730	0.52	-0.5
1,567,966	-		BPHYT_RS26730	0.89	-1.5
1,568,193	+				+0.0
1,568,382	+				+4.7
1,568,382	+				+0.5
1,568,734	-		BPHYT_RS26735	0.22	+0.8
1,568,994	+		BPHYT_RS26735	0.37	+0.7
1,568,995	-		BPHYT_RS26735	0.37	-0.0
1,569,061	-		BPHYT_RS26735	0.41	-0.1
1,569,136	-		BPHYT_RS26735	0.45	-0.1