Experiment: 36hr PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS22065 and BPHYT_RS22070 are separated by 514 nucleotides BPHYT_RS22070 and BPHYT_RS22075 are separated by 404 nucleotides
BPHYT_RS22065: BPHYT_RS22065 - DNA-binding protein, at 506,911 to 508,383
_RS22065
BPHYT_RS22070: BPHYT_RS22070 - DNA-binding protein, at 508,898 to 509,350
_RS22070
BPHYT_RS22075: BPHYT_RS22075 - hypothetical protein, at 509,755 to 511,164
_RS22075
Position (kb) 508
509
510 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 507.935 kb on - strand, within BPHYT_RS22065 at 507.959 kb on - strand, within BPHYT_RS22065 at 508.085 kb on - strand, within BPHYT_RS22065 at 508.268 kb on - strand at 508.315 kb on - strand at 508.381 kb on + strand at 508.466 kb on - strand at 508.573 kb on - strand at 508.676 kb on - strand at 508.685 kb on + strand at 508.788 kb on - strand at 508.788 kb on - strand at 509.377 kb on + strand at 509.434 kb on + strand at 509.435 kb on - strand at 509.435 kb on - strand at 509.435 kb on - strand at 509.484 kb on + strand at 509.534 kb on + strand at 509.557 kb on + strand at 509.557 kb on + strand at 509.557 kb on + strand at 509.557 kb on + strand at 509.558 kb on - strand at 509.567 kb on - strand at 509.654 kb on + strand at 509.675 kb on + strand at 509.728 kb on + strand at 509.764 kb on + strand at 509.764 kb on + strand at 509.765 kb on - strand at 510.052 kb on + strand, within BPHYT_RS22075 at 510.052 kb on + strand, within BPHYT_RS22075 at 510.052 kb on + strand, within BPHYT_RS22075 at 510.053 kb on - strand, within BPHYT_RS22075 at 510.104 kb on - strand, within BPHYT_RS22075 at 510.168 kb on + strand, within BPHYT_RS22075 at 510.215 kb on - strand, within BPHYT_RS22075 at 510.256 kb on + strand, within BPHYT_RS22075 at 510.257 kb on - strand, within BPHYT_RS22075 at 510.257 kb on - strand, within BPHYT_RS22075 at 510.258 kb on + strand, within BPHYT_RS22075 at 510.258 kb on + strand, within BPHYT_RS22075
Per-strain Table
Position Strand Gene LocusTag Fraction 36hr PHYTO2 MOI 1 remove 507,935 - BPHYT_RS22065 0.70 -0.4 507,959 - BPHYT_RS22065 0.71 -1.1 508,085 - BPHYT_RS22065 0.80 -0.6 508,268 - +0.1 508,315 - -0.3 508,381 + -0.5 508,466 - -0.9 508,573 - +2.4 508,676 - -1.7 508,685 + -0.9 508,788 - +2.4 508,788 - +1.1 509,377 + -1.1 509,434 + -0.1 509,435 - +0.8 509,435 - +0.9 509,435 - -1.1 509,484 + +1.9 509,534 + +0.2 509,557 + +0.4 509,557 + -0.5 509,557 + -0.1 509,557 + +0.6 509,558 - +3.9 509,567 - -0.2 509,654 + -1.7 509,675 + -0.8 509,728 + -0.3 509,764 + +0.5 509,764 + +0.7 509,765 - -0.6 510,052 + BPHYT_RS22075 0.21 +0.6 510,052 + BPHYT_RS22075 0.21 -3.0 510,052 + BPHYT_RS22075 0.21 +0.7 510,053 - BPHYT_RS22075 0.21 -0.9 510,104 - BPHYT_RS22075 0.25 -0.4 510,168 + BPHYT_RS22075 0.29 +0.4 510,215 - BPHYT_RS22075 0.33 -0.4 510,256 + BPHYT_RS22075 0.36 +0.1 510,257 - BPHYT_RS22075 0.36 -0.2 510,257 - BPHYT_RS22075 0.36 -0.2 510,258 + BPHYT_RS22075 0.36 -0.2 510,258 + BPHYT_RS22075 0.36 +1.2
Or see this region's nucleotide sequence