Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20905
Experiment: 36hr PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO2 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 250,651 | - | BPHYT_RS20900 | 0.60 | -0.8 | |
| 250,875 | + | BPHYT_RS20900 | 0.78 | -1.0 | |
| 250,876 | - | BPHYT_RS20900 | 0.78 | -0.5 | |
| 251,401 | - | +0.4 | |||
| 251,704 | - | BPHYT_RS20905 | 0.36 | -0.4 | |
| 251,975 | + | BPHYT_RS20905 | 0.89 | -0.2 | |
| 251,975 | + | BPHYT_RS20905 | 0.89 | -1.1 | |
| 252,119 | + | -1.9 | |||
| 252,122 | + | -1.0 | |||
| 252,128 | - | -0.1 | |||
| 252,428 | - | BPHYT_RS20910 | 0.12 | +0.1 | |
| 252,428 | - | BPHYT_RS20910 | 0.12 | +1.0 | |
| 252,998 | - | BPHYT_RS20910 | 0.37 | -0.3 |
Or see this region's nucleotide sequence