Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18920

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
4,248,503	-		BPHYT_RS18910	0.70	-0.8
4,248,539	+		BPHYT_RS18910	0.78	-0.2
4,248,540	-		BPHYT_RS18910	0.78	+1.4
4,248,596	+				-1.6
4,248,597	-				+0.1
4,248,775	-				-1.3
4,248,837	+				+1.2
4,248,837	+				-0.3
4,248,838	-				+0.0
4,248,896	+				+0.1
4,248,945	+				+1.0
4,249,411	+		BPHYT_RS18920	0.70	-1.2
4,249,411	+		BPHYT_RS18920	0.70	+0.8
4,249,415	+		BPHYT_RS18920	0.71	-0.2
4,249,415	+		BPHYT_RS18920	0.71	-0.1
4,249,421	+		BPHYT_RS18920	0.72	+0.4
4,249,421	+		BPHYT_RS18920	0.72	+0.4
4,249,461	+		BPHYT_RS18920	0.82	-0.4
4,249,738	+		BPHYT_RS18925	0.19	+0.1
4,249,738	+		BPHYT_RS18925	0.19	+0.9
4,249,739	-		BPHYT_RS18925	0.19	+0.2
4,249,903	+		BPHYT_RS18925	0.42	+0.5
4,249,906	+		BPHYT_RS18925	0.42	+0.2
4,249,907	-		BPHYT_RS18925	0.42	-0.8
4,249,907	-		BPHYT_RS18925	0.42	+2.1
4,249,948	+		BPHYT_RS18925	0.48	-1.0
4,249,949	-		BPHYT_RS18925	0.48	-0.5
4,249,949	-		BPHYT_RS18925	0.48	-0.7
4,250,131	+		BPHYT_RS18925	0.73	+0.0
4,250,165	-		BPHYT_RS18925	0.77	+0.3
4,250,281	+				+1.4
4,250,282	-				+0.0
4,250,326	+				-0.9
4,250,326	+				+0.2
4,250,326	+				+0.3
4,250,326	+				+0.2
4,250,326	+				-0.5
4,250,327	-				+0.9
4,250,327	-				+0.3
4,250,327	-				-0.3
4,250,327	-				+0.2
4,250,463	-		BPHYT_RS18930	0.12	-0.5
4,250,463	-		BPHYT_RS18930	0.12	-0.4