Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18805

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
4,227,774	+		BPHYT_RS18800	0.70	-1.4
4,227,775	-		BPHYT_RS18800	0.70	-0.1
4,227,775	-		BPHYT_RS18800	0.70	-0.6
4,227,899	+		BPHYT_RS18800	0.78	+0.8
4,227,900	-		BPHYT_RS18800	0.78	-0.1
4,228,178	+				-0.0
4,228,179	-				-1.6
4,228,294	+				-1.6
4,228,499	-				+0.2
4,228,499	-				-0.8
4,228,524	+				-0.2
4,228,555	+				-1.3
4,228,555	+				-0.4
4,228,612	+				+0.0
4,228,684	+				-0.5
4,228,793	+		BPHYT_RS18805	0.17	-1.1
4,228,979	-		BPHYT_RS18805	0.54	-1.5
4,228,979	-		BPHYT_RS18805	0.54	-1.1
4,229,032	+		BPHYT_RS18805	0.65	-1.7
4,229,032	+		BPHYT_RS18805	0.65	-1.1
4,229,033	-		BPHYT_RS18805	0.65	-1.1
4,229,267	+				+0.9
4,229,268	-				-0.4
4,229,268	-				-2.0
4,229,268	-				-0.5
4,229,268	-				-0.0
4,229,385	-		BPHYT_RS18810	0.11	+0.1
4,229,537	+		BPHYT_RS18810	0.26	+0.3
4,229,617	-		BPHYT_RS18810	0.34	+0.4
4,229,765	+		BPHYT_RS18810	0.49	+1.5
4,229,765	+		BPHYT_RS18810	0.49	+0.4
4,229,765	+		BPHYT_RS18810	0.49	-1.5
4,229,765	+		BPHYT_RS18810	0.49	+0.1
4,229,765	+		BPHYT_RS18810	0.49	+0.1
4,229,766	-		BPHYT_RS18810	0.49	-0.8
4,229,766	-		BPHYT_RS18810	0.49	-0.3
4,229,917	+		BPHYT_RS18810	0.64	+0.2
4,229,917	+		BPHYT_RS18810	0.64	-0.2
4,229,918	-		BPHYT_RS18810	0.65	-0.7
4,229,918	-		BPHYT_RS18810	0.65	-0.7
4,229,918	-		BPHYT_RS18810	0.65	-0.1
4,229,918	-		BPHYT_RS18810	0.65	-0.1
4,229,918	-		BPHYT_RS18810	0.65	-0.9
4,230,207	-				+0.6