Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16320

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,702,969	-		BPHYT_RS16315	0.60	+0.8
3,702,988	-		BPHYT_RS16315	0.61	+0.5
3,702,988	-		BPHYT_RS16315	0.61	+0.8
3,703,203	+		BPHYT_RS16315	0.74	+1.6
3,703,204	-		BPHYT_RS16315	0.74	-0.3
3,703,204	-		BPHYT_RS16315	0.74	-0.4
3,703,204	-		BPHYT_RS16315	0.74	-0.4
3,703,251	+		BPHYT_RS16315	0.76	-0.4
3,703,252	-		BPHYT_RS16315	0.76	+0.1
3,703,278	+		BPHYT_RS16315	0.78	-1.8
3,703,342	+		BPHYT_RS16315	0.82	-1.5
3,703,423	+		BPHYT_RS16315	0.86	+0.3
3,703,455	+		BPHYT_RS16315	0.88	+0.4
3,703,456	-		BPHYT_RS16315	0.88	-0.8
3,703,564	+				-0.4
3,703,703	-				+1.1
3,703,703	-				+0.3
3,703,727	+				+0.2
3,703,727	+				-1.1
3,703,868	+				-2.0
3,703,868	+				+0.3
3,703,868	+				+1.0
3,703,868	+				-0.3
3,703,869	-				+0.9
3,703,873	+				+1.6
3,703,874	-				-0.5
3,703,885	+				+1.3
3,703,940	+				+0.3
3,703,940	+				+0.1
3,703,940	+				-0.8
3,704,277	+		BPHYT_RS16320	0.79	-2.3
3,704,278	-		BPHYT_RS16320	0.79	-0.9
3,704,278	-		BPHYT_RS16320	0.79	-1.2
3,704,278	-		BPHYT_RS16320	0.79	-0.8
3,704,408	+				+0.4
3,704,467	+				-0.1
3,704,468	-				-0.6
3,704,593	-				-1.3