Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15860

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,600,776	+				-0.1
3,600,777	-				-2.8
3,600,794	+				+0.7
3,600,794	+				+0.3
3,600,794	+				+0.5
3,600,795	-				-0.3
3,600,795	-				+0.2
3,600,795	-				-1.3
3,600,795	-				-0.6
3,600,839	+		BPHYT_RS15855	0.12	-1.3
3,600,840	-		BPHYT_RS15855	0.12	+0.2
3,600,840	-		BPHYT_RS15855	0.12	-0.4
3,600,840	-		BPHYT_RS15855	0.12	-1.6
3,600,840	-		BPHYT_RS15855	0.12	-3.0
3,600,857	+		BPHYT_RS15855	0.15	+0.3
3,600,875	+		BPHYT_RS15855	0.18	-0.9
3,600,875	+		BPHYT_RS15855	0.18	+0.3
3,600,945	-		BPHYT_RS15855	0.30	-1.5
3,601,114	-		BPHYT_RS15855	0.59	-1.3
3,601,170	-		BPHYT_RS15855	0.69	+2.3
3,601,190	+		BPHYT_RS15855	0.73	-0.7
3,601,191	-		BPHYT_RS15855	0.73	-0.4
3,601,378	+				+0.2
3,601,378	+				-0.9
3,601,378	+				-1.5
3,601,378	+				+0.8
3,601,379	-				-1.9
3,601,383	+				-3.1
3,601,416	-				-1.5
3,601,419	+				+2.4
3,601,419	+				+0.8
3,601,420	-				-0.9
3,601,420	-				-1.2
3,601,541	+				+1.7
3,602,463	+				+0.5
3,602,463	+				+0.9
3,602,464	-				-0.9
3,602,509	+				-2.3
3,602,777	+		BPHYT_RS15865	0.17	-1.2
3,602,778	-		BPHYT_RS15865	0.17	+2.3