Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15530

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,522,545	-		BPHYT_RS15525	0.27	+0.7
3,522,633	-		BPHYT_RS15525	0.36	-0.5
3,522,634	+		BPHYT_RS15525	0.37	+0.1
3,522,634	+		BPHYT_RS15525	0.37	-0.2
3,522,634	+		BPHYT_RS15525	0.37	-0.5
3,522,634	+		BPHYT_RS15525	0.37	-1.3
3,522,634	+		BPHYT_RS15525	0.37	+0.6
3,522,635	-		BPHYT_RS15525	0.37	+0.2
3,522,832	+		BPHYT_RS15525	0.58	+0.6
3,522,835	+		BPHYT_RS15525	0.59	+1.6
3,522,836	-		BPHYT_RS15525	0.59	+0.6
3,523,250	+				+0.1
3,523,250	+				+1.0
3,523,619	+		BPHYT_RS15530	0.44	-0.7
3,523,619	+		BPHYT_RS15530	0.44	-2.6
3,523,619	+		BPHYT_RS15530	0.44	-1.7
3,523,619	+		BPHYT_RS15530	0.44	-0.7
3,523,620	-		BPHYT_RS15530	0.44	+0.0
3,524,052	+				-0.6
3,524,052	+				+0.2
3,524,053	-				-1.2
3,524,053	-				-0.5
3,524,053	-				-0.3
3,524,187	+				-1.3
3,524,310	-				+0.2
3,524,483	+		BPHYT_RS15535	0.14	+3.3
3,524,582	+		BPHYT_RS15535	0.21	+0.6
3,524,586	-		BPHYT_RS15535	0.21	-1.2
3,524,586	-		BPHYT_RS15535	0.21	-0.3
3,524,733	-		BPHYT_RS15535	0.30	+0.0
3,524,738	+		BPHYT_RS15535	0.31	-1.3
3,524,931	-		BPHYT_RS15535	0.43	+0.7
3,524,992	-		BPHYT_RS15535	0.47	+0.8
3,524,993	+		BPHYT_RS15535	0.47	-1.8
3,524,994	-		BPHYT_RS15535	0.47	-2.3