Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14120

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
3,224,474	-		BPHYT_RS14115	0.50	+0.3
3,224,898	+		BPHYT_RS14115	0.82	+0.2
3,224,898	+		BPHYT_RS14115	0.82	+0.1
3,224,899	-		BPHYT_RS14115	0.83	-0.6
3,225,153	+				-1.3
3,225,291	+				-0.5
3,225,291	+				+2.0
3,225,336	+		BPHYT_RS14120	0.14	+0.5
3,225,336	+		BPHYT_RS14120	0.14	-2.5
3,225,638	+		BPHYT_RS14120	0.57	+0.2
3,225,714	+		BPHYT_RS14120	0.67	-1.3
3,225,845	+		BPHYT_RS14120	0.86	-1.0
3,225,846	-		BPHYT_RS14120	0.86	-0.3
3,225,971	-				-1.3
3,226,036	+				+1.3
3,226,147	+		BPHYT_RS14125	0.25	-0.6
3,226,148	-		BPHYT_RS14125	0.25	-0.2
3,226,679	-				+0.2
3,226,679	-				+1.0
3,226,688	+				+0.1
3,226,688	+				-0.3
3,226,688	+				+1.0
3,226,688	+				-2.4
3,226,689	-				+1.8
3,226,724	+				-0.1
3,226,724	+				+0.4
3,226,799	+		BPHYT_RS14130	0.11	+0.0
3,226,799	+		BPHYT_RS14130	0.11	-0.5
3,226,803	+		BPHYT_RS14130	0.12	-1.3
3,226,803	+		BPHYT_RS14130	0.12	+1.3
3,226,803	+		BPHYT_RS14130	0.12	+1.8
3,226,803	+		BPHYT_RS14130	0.12	+0.6
3,226,803	+		BPHYT_RS14130	0.12	+0.5
3,226,805	+		BPHYT_RS14130	0.12	+0.5
3,226,805	+		BPHYT_RS14130	0.12	-0.2
3,226,814	+		BPHYT_RS14130	0.13	+2.3
3,226,868	+		BPHYT_RS14130	0.20	+2.2