Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11500

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,614,193	-		BPHYT_RS11495	0.28	-1.7
2,614,193	-		BPHYT_RS11495	0.28	+2.4
2,614,610	-		BPHYT_RS11495	0.65	+0.6
2,615,152	-		BPHYT_RS11500	0.11	+0.2
2,615,644	-		BPHYT_RS11500	0.64	+1.2
2,615,659	-		BPHYT_RS11500	0.66	+1.9
2,616,008	-				+0.3
2,616,046	-				+2.2
2,616,277	-		BPHYT_RS11505	0.23	+1.0
2,616,636	-		BPHYT_RS11505	0.55	-0.9
2,616,636	-		BPHYT_RS11505	0.55	+2.3
2,616,640	+		BPHYT_RS11505	0.56	-2.1
2,616,640	+		BPHYT_RS11505	0.56	+0.7
2,616,640	+		BPHYT_RS11505	0.56	-1.1
2,616,641	-		BPHYT_RS11505	0.56	+3.2
2,616,659	+		BPHYT_RS11505	0.58	-1.1
2,616,660	-		BPHYT_RS11505	0.58	-2.3